[ensembl-dev] Getting all variations associated with gene

gaurav thareja gaurav4thareja at gmail.com
Thu Aug 25 07:52:24 BST 2011


Hi all,

I am trying to get all variations associated with gene name. As there is no
direct way to do so, using perl API, I am using Perl API to get ensembl gene
ID for a given common gene name  and then using Biomart filter as ensembl
gene ID to get all variations.

1) Is there any simpler way to do this?
2) Does this will provide complete list of variations or still I can miss
some variations for that gene?


Regards

Gaurav Thareja
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