[ensembl-dev] CCDS entries

[Reece Hart]

On Fri, Apr 8, 2011 at 4:51 AM, Oliver, Gavin
<gavin.oliver at almacgroup.com>wrote:

> Hi all – is there a quick way of checking if a transcript has a CCDS id
> associated with it?
>
>
>
> i.e. without cycling through all the xrefs
>
>
I didn't see an answer to your question on the list.

You should be able to do something like:
my (@ccds) = @{ $tx->get_all_DBLinks('CCDS') };
print "it has a CCDS\n" if @ccds;

$tx is a Bio::EnsEMBL::Transcript, of course.

-Reece
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