[ensembl-dev] Extracting microarray annotation

Oliver, Gavin gavin.oliver at almacgroup.com
Mon Oct 11 14:18:27 BST 2010

Hi all, 


I am writing a script to access the EFG database and extract microarray


In essence I use an array adaptor to retrieve all probesets and then
cycle through these extracting information at the probe and probeset


Just wondering if there are any tips for writing these so that they run
as quickly as possible.  I have looked at the
microaray_annotation_example.pl script but just wondering if there are
any other general pointers.





The contents of this message and any attachments to it are confidential and may be legally privileged. If you have received this message in error, you should delete it from your system immediately and advise the sender.

Almac Group (UK) Limited, registered no. NI061368.  Almac Sciences Limited, registered no. NI041550.  Almac Discovery Limited, registered no. NI046249.  Almac Pharma Services Limited, registered no. NI045055.  Almac Clinical Services Limited, registered no. NI041905.  Almac Clinical Technologies Limited, registered no. NI061202.  Almac Diagnostics Limited, registered no. NI043067.  All preceding companies are registered in Northern Ireland with a registered office address of Almac House, 20 Seagoe Industrial Estate, Craigavon, BT63 5QD, UK.  

Almac Sciences (Scotland) Limited, registered in Scotland no. SC154034. 

Almac Clinical Services LLC, Almac Clinical Technologies LLC and Almac Diagnostics LLC are Delaware limited liability companies and Almac Group Incorporated is a Delaware Corporation.  More information on the Almac Group can be found on the Almac website: www.almacgroup.com

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20101011/68894450/attachment.html>

More information about the Dev mailing list