[ensembl-dev] variant effect prediction non_synonymous without alleles?

mailsvl at fastmail.fm mailsvl at fastmail.fm
Thu Dec 23 15:25:49 GMT 2010


Hi,

When I use the variant effect predictor (either online or with api) for
this snv:

10_3181003_A/G 10:3181003 ENSG00000107959 ENST00000455371
NON_SYNONYMOUS_CODING 553 185 /Q rs2279217

You can see it predicts NON_SYN with only one allele in the change (
/Q), how is this possible?

Thanks,
Stef

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