[ensembl-dev] New CPAN Release based on Ensembl - Bio::Homology::InterologWalk - A Perl Module to retrieve putative PPIs through Interologs

Giuseppe Gallone G.Gallone at sms.ed.ac.uk
Tue Aug 31 13:01:35 BST 2010


Dear Ensembl Developers,

I would like to announce the release of a Perl module based on the 
Ensembl/EBI Intact API and Data - Bio::Homology::InterologWalk, a
module to retrieve, score and visualize putative Protein-Protein
Interactions through the orthology-walk method.

The project is available from the following link

http://search.cpan.org/~ggallone/

and a description of the idea behind it is here

http://search.cpan.org/~ggallone/Bio-Homology-InterologWalk-0.02/lib/Bio/Homology/InterologWalk.pm#DESCRIPTION

Please note Bio::Homology::InterologWalk is in a very early stage 
(currently ver. 0.02 alpha) and has currently been tested only on Linux 
environments. It has not been tested on Macs, but it should work fine, 
and I would appreciate any feedback from Mac users who try it.

Actually *any* form of feedback  will be extremely appreciated (bugs, 
Ensembl API-related improvements, typos, verbal abuse etc :) ).


Best,
Giuseppe


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