From dstaines at ebi.ac.uk Fri Sep 5 14:39:56 2014 From: dstaines at ebi.ac.uk (Dan Staines) Date: Fri, 05 Sep 2014 14:39:56 +0100 Subject: [ensembl-announce] Public Ensembl Genomes MySQL server downtime Message-ID: <5409BD2C.2050905@ebi.ac.uk> The public Ensembl Genomes server on mysql.ebi.ac.uk/mysql-eg-publicsql.ebi.ac.uk needs restarting to fix an urgent problem. This will happen at 16.30 BST today, and should take no more than a few minutes. Apologies for any inconvenience. Thanks, Dan. -- Dan Staines, PhD Technical Coordinator, Ensembl Genomes European Bioinformatics Institute (EMBL-EBI) http://www.ebi.ac.uk/ http://www.ensemblgenomes.org/ From gspudich at ebi.ac.uk Mon Sep 15 11:46:05 2014 From: gspudich at ebi.ac.uk (Giulietta) Date: Mon, 15 Sep 2014 11:46:05 +0100 Subject: [ensembl-announce] GRC & Ensembl joint webinar on Wednesday In-Reply-To: <5416C309.3090202@ebi.ac.uk> References: <5416C309.3090202@ebi.ac.uk> Message-ID: <5416C36D.30404@ebi.ac.uk> Dear all, Delve deeper into the new human assembly (GRCh38) and the newest gene annotation in Ensembl (GENCODE 20). Join our upcoming (free) webinar- a joint presentation between Ensembl and the Genome Reference Informatics Group. When? Wednesday 17 Sept 4 PM-4:30 PM GMT Register here: http://tinyurl.com/GRCh38-webinar What? The new human assembly (GRCh38) and comprehensive annotation such as genes, sequence variants, and whole genome alignments are accessible through Ensembl (website @ www.ensembl.org or underlying databases). In this free, 30 min webinar, GRC and Ensembl will discuss the assembly and the newest annotation for human. Who? Speakers are: James Torrance & Jo Wood (Genome Reference Informatics Group, WTSI), Carlos Garcia Giron (Vertebrate Genomics, EMBL-EBI) and Denise Carvalho-Silva (Ensembl Outreach EMBL-EBI) Regards, The Ensembl Team -- Mailing lists: www.ensembl.org/info/about/contact/mailing.html Blog: www.ensembl.info YouTube: www.youtube.com/user/EnsemblHelpdesk Online course: www.ensembl.info/ecourse Facebook: www.facebook.com/Ensembl.org Twitter: twitter.com/Ensembl -------------- next part -------------- An HTML attachment was scrubbed... URL: From mr6 at ebi.ac.uk Fri Sep 19 10:59:07 2014 From: mr6 at ebi.ac.uk (mag) Date: Fri, 19 Sep 2014 10:59:07 +0100 Subject: [ensembl-announce] Beta REST server to be retired Message-ID: <541BFE6B.1000508@ebi.ac.uk> Dear all, As previously announced, we are retiring our beta rest server (http://beta.rest.ensembl.org) This server is no longer maintained and will be effectively switched off the first week of October, in time for our release 77. If you have not yet migrated to http://rest.ensembl.org, our wiki can guide you in the process https://github.com/Ensembl/ensembl-rest/wiki/1.0-To-3.0-Migration If you wish to continue using the GRCh37 human assembly, there is a dedicated REST server available on http://grch37.rest.ensembl.org If you are new to REST, please use our wiki (https://github.com/Ensembl/ensembl-rest/wiki) to get started. Do not hesitate to contact us with any enquiries. Regards, Magali From dstaines at ebi.ac.uk Tue Sep 30 17:39:45 2014 From: dstaines at ebi.ac.uk (Dan Staines) Date: Tue, 30 Sep 2014 17:39:45 +0100 Subject: [ensembl-announce] Ensembl Genomes Release 24 Intentions In-Reply-To: <53F72974.4020400@ebi.ac.uk> References: <53F72974.4020400@ebi.ac.uk> Message-ID: <542ADCD1.2090803@ebi.ac.uk> Please note that due to constraints imposed by significant changes to the infrastructure used by EBI services, release 24 of Ensembl Genomes will be delayed and is now anticipated to be released on November 11th 2014. Apologies for any inconvenience caused. Regards, Dan Staines, on behalf of the Ensembl Genomes team. -- Dan Staines, PhD Technical Coordinator, Ensembl Genomes European Bioinformatics Institute (EMBL-EBI) http://www.ebi.ac.uk/ http://www.ensemblgenomes.org/ From dstaines at ebi.ac.uk Fri Sep 5 14:39:56 2014 From: dstaines at ebi.ac.uk (Dan Staines) Date: Fri, 05 Sep 2014 14:39:56 +0100 Subject: [ensembl-announce] Public Ensembl Genomes MySQL server downtime Message-ID: <5409BD2C.2050905@ebi.ac.uk> The public Ensembl Genomes server on mysql.ebi.ac.uk/mysql-eg-publicsql.ebi.ac.uk needs restarting to fix an urgent problem. This will happen at 16.30 BST today, and should take no more than a few minutes. Apologies for any inconvenience. Thanks, Dan. -- Dan Staines, PhD Technical Coordinator, Ensembl Genomes European Bioinformatics Institute (EMBL-EBI) http://www.ebi.ac.uk/ http://www.ensemblgenomes.org/ From gspudich at ebi.ac.uk Mon Sep 15 11:46:05 2014 From: gspudich at ebi.ac.uk (Giulietta) Date: Mon, 15 Sep 2014 11:46:05 +0100 Subject: [ensembl-announce] GRC & Ensembl joint webinar on Wednesday In-Reply-To: <5416C309.3090202@ebi.ac.uk> References: <5416C309.3090202@ebi.ac.uk> Message-ID: <5416C36D.30404@ebi.ac.uk> Dear all, Delve deeper into the new human assembly (GRCh38) and the newest gene annotation in Ensembl (GENCODE 20). Join our upcoming (free) webinar- a joint presentation between Ensembl and the Genome Reference Informatics Group. When? Wednesday 17 Sept 4 PM-4:30 PM GMT Register here: http://tinyurl.com/GRCh38-webinar What? The new human assembly (GRCh38) and comprehensive annotation such as genes, sequence variants, and whole genome alignments are accessible through Ensembl (website @ www.ensembl.org or underlying databases). In this free, 30 min webinar, GRC and Ensembl will discuss the assembly and the newest annotation for human. Who? Speakers are: James Torrance & Jo Wood (Genome Reference Informatics Group, WTSI), Carlos Garcia Giron (Vertebrate Genomics, EMBL-EBI) and Denise Carvalho-Silva (Ensembl Outreach EMBL-EBI) Regards, The Ensembl Team -- Mailing lists: www.ensembl.org/info/about/contact/mailing.html Blog: www.ensembl.info YouTube: www.youtube.com/user/EnsemblHelpdesk Online course: www.ensembl.info/ecourse Facebook: www.facebook.com/Ensembl.org Twitter: twitter.com/Ensembl -------------- next part -------------- An HTML attachment was scrubbed... URL: From mr6 at ebi.ac.uk Fri Sep 19 10:59:07 2014 From: mr6 at ebi.ac.uk (mag) Date: Fri, 19 Sep 2014 10:59:07 +0100 Subject: [ensembl-announce] Beta REST server to be retired Message-ID: <541BFE6B.1000508@ebi.ac.uk> Dear all, As previously announced, we are retiring our beta rest server (http://beta.rest.ensembl.org) This server is no longer maintained and will be effectively switched off the first week of October, in time for our release 77. If you have not yet migrated to http://rest.ensembl.org, our wiki can guide you in the process https://github.com/Ensembl/ensembl-rest/wiki/1.0-To-3.0-Migration If you wish to continue using the GRCh37 human assembly, there is a dedicated REST server available on http://grch37.rest.ensembl.org If you are new to REST, please use our wiki (https://github.com/Ensembl/ensembl-rest/wiki) to get started. Do not hesitate to contact us with any enquiries. Regards, Magali From dstaines at ebi.ac.uk Tue Sep 30 17:39:45 2014 From: dstaines at ebi.ac.uk (Dan Staines) Date: Tue, 30 Sep 2014 17:39:45 +0100 Subject: [ensembl-announce] Ensembl Genomes Release 24 Intentions In-Reply-To: <53F72974.4020400@ebi.ac.uk> References: <53F72974.4020400@ebi.ac.uk> Message-ID: <542ADCD1.2090803@ebi.ac.uk> Please note that due to constraints imposed by significant changes to the infrastructure used by EBI services, release 24 of Ensembl Genomes will be delayed and is now anticipated to be released on November 11th 2014. Apologies for any inconvenience caused. Regards, Dan Staines, on behalf of the Ensembl Genomes team. -- Dan Staines, PhD Technical Coordinator, Ensembl Genomes European Bioinformatics Institute (EMBL-EBI) http://www.ebi.ac.uk/ http://www.ensemblgenomes.org/