From maurel at ebi.ac.uk Thu Oct 2 11:44:05 2014 From: maurel at ebi.ac.uk (Thomas Maurel) Date: Thu, 2 Oct 2014 11:44:05 +0100 Subject: [ensembl-announce] Ensembl release 77 is out! Message-ID: <9AC09A79-29F7-447D-AC42-DB11B15F0F66@ebi.ac.uk> We are pleased to announce that the latest Ensembl update (e!77) has been released: http://www.ensembl.org/ Highlights of this release include: Updated human gene set (GENCODE 21) Updated rat gene set including manual annotation from HAVANA New species: Vervet-African green monkey Imported Transcript Support Levels (TSLs) from UCSC for human and mouse New APPRIS flag for human and mouse Updated and improved amazon molly gene set Data matrix configuration extended to all species with RNASeq data Added new studies and updated other studies for human from DGVa Updated human phenotype from ClinVar and Decipher Updated mouse phenotype from IMPC A complete list of the changes in release 77 can be found at http://www.ensembl.org/info/website/news.html For the latest news from the Ensembl project visit our blog at http://www.ensembl.info The release 77 blog post can be viewed here: http://www.ensembl.info/blog/2014/10/02/ensembl-77-has-been-released/ Find out more at the Ensembl Release Webinar e77 (Thu, October 16, 2014 4:00 PM - 4.30 PM GMT). Register for free here: http://tinyurl.com/ensembl-oct-release Best Regards, Thomas -- Thomas Maurel Bioinformatician - Ensembl Production Team European Bioinformatics Institute (EMBL-EBI) European Molecular Biology Laboratory Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom -------------- next part -------------- An HTML attachment was scrubbed... URL: From denise at ebi.ac.uk Wed Oct 8 14:05:26 2014 From: denise at ebi.ac.uk (Denise Carvalho-Silva) Date: Wed, 8 Oct 2014 14:05:26 +0100 Subject: [ensembl-announce] Free Webinar: Ensembl new release, e77 Message-ID: Dear all, Would you like to know what is new in Ensembl release 77? Sign up for our free Ensembl webinar! When: Thursday, October 16th, 16:00-16:30 BST Topics: Our latest human geneset (GENCODE 21), Transcript Support Levels (how well a splice-variant seems to be supported) and our new species, Vervet Monkey. Free Registration: http://tinyurl.com/ensembl-oct-release We will focus on the new information we have about genes and transcripts (splice variants), namely: ? GENCODE 21 ? Transcript support levels (from UCSC) ? APPRIS: A system for annotating splice variants (from CNIO) Best wishes, The Ensembl Team From amonida at ebi.ac.uk Wed Oct 15 14:37:26 2014 From: amonida at ebi.ac.uk (Amonida Zadissa) Date: Wed, 15 Oct 2014 14:37:26 +0100 Subject: [ensembl-announce] Declarations of intentions for Ensembl Release 78 Message-ID: <543E7896.5030501@ebi.ac.uk> Hi all, Please find the summary of the declarations of intentions for Ensembl release 78 on our public website (http://admin.ensembl.org/Changelog/Summary). This release is scheduled for 03 December 2014. Note these are intentions and are not guaranteed to be in the release. Cheers, Amonida From maurel at ebi.ac.uk Thu Oct 2 11:44:05 2014 From: maurel at ebi.ac.uk (Thomas Maurel) Date: Thu, 2 Oct 2014 11:44:05 +0100 Subject: [ensembl-announce] Ensembl release 77 is out! Message-ID: <9AC09A79-29F7-447D-AC42-DB11B15F0F66@ebi.ac.uk> We are pleased to announce that the latest Ensembl update (e!77) has been released: http://www.ensembl.org/ Highlights of this release include: Updated human gene set (GENCODE 21) Updated rat gene set including manual annotation from HAVANA New species: Vervet-African green monkey Imported Transcript Support Levels (TSLs) from UCSC for human and mouse New APPRIS flag for human and mouse Updated and improved amazon molly gene set Data matrix configuration extended to all species with RNASeq data Added new studies and updated other studies for human from DGVa Updated human phenotype from ClinVar and Decipher Updated mouse phenotype from IMPC A complete list of the changes in release 77 can be found at http://www.ensembl.org/info/website/news.html For the latest news from the Ensembl project visit our blog at http://www.ensembl.info The release 77 blog post can be viewed here: http://www.ensembl.info/blog/2014/10/02/ensembl-77-has-been-released/ Find out more at the Ensembl Release Webinar e77 (Thu, October 16, 2014 4:00 PM - 4.30 PM GMT). Register for free here: http://tinyurl.com/ensembl-oct-release Best Regards, Thomas -- Thomas Maurel Bioinformatician - Ensembl Production Team European Bioinformatics Institute (EMBL-EBI) European Molecular Biology Laboratory Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom -------------- next part -------------- An HTML attachment was scrubbed... URL: From denise at ebi.ac.uk Wed Oct 8 14:05:26 2014 From: denise at ebi.ac.uk (Denise Carvalho-Silva) Date: Wed, 8 Oct 2014 14:05:26 +0100 Subject: [ensembl-announce] Free Webinar: Ensembl new release, e77 Message-ID: Dear all, Would you like to know what is new in Ensembl release 77? Sign up for our free Ensembl webinar! When: Thursday, October 16th, 16:00-16:30 BST Topics: Our latest human geneset (GENCODE 21), Transcript Support Levels (how well a splice-variant seems to be supported) and our new species, Vervet Monkey. Free Registration: http://tinyurl.com/ensembl-oct-release We will focus on the new information we have about genes and transcripts (splice variants), namely: ? GENCODE 21 ? Transcript support levels (from UCSC) ? APPRIS: A system for annotating splice variants (from CNIO) Best wishes, The Ensembl Team From amonida at ebi.ac.uk Wed Oct 15 14:37:26 2014 From: amonida at ebi.ac.uk (Amonida Zadissa) Date: Wed, 15 Oct 2014 14:37:26 +0100 Subject: [ensembl-announce] Declarations of intentions for Ensembl Release 78 Message-ID: <543E7896.5030501@ebi.ac.uk> Hi all, Please find the summary of the declarations of intentions for Ensembl release 78 on our public website (http://admin.ensembl.org/Changelog/Summary). This release is scheduled for 03 December 2014. Note these are intentions and are not guaranteed to be in the release. Cheers, Amonida