[ensembl-announce] Ensembl Genomes release 22 is out!
Denise Carvalho-Silva
denise at ebi.ac.uk
Mon Apr 7 15:53:36 BST 2014
Dear all,
We are delighted to announce that the latest update of Ensembl Genomes has been released.
The highlights of release 22 are:
New Genomes
Ensembl Plants
Amborella trichopoda
Prunus persica (peach)
Oryza (rice) genomes: O. barthii, O. glumaepatula, O. meridionalis, O. nivara, and O. punctate
Ensembl Protists
Bigelowiella natans
Pythium (plant pathogens) genomes: P. aphanidermatum, P. arrhenomanes, P. irregulare, P. iwayamai, P. ultimum, and P. vexans
Ensembl Metazoa
Onchocerca volvulus
Ensembl Bacteria
1,246 additional genomes (11,010 genomes now represented in total)
New data
Ensembl Plants
Sorghum bicolor variation data based on the SAP panel (Morris et. al. 2013)
Homoeologous genes between the wheat component A, B and D genomes
Whole genome alignments
Inter-homoleogue alignments between the wheat A, B and D genomes, and integration with the gene trees
Between Amborella trichopoda and Arabidopsis thaliana, and Amborella trichopoda and Oriza sativa Japonica
Between the five new rice genomes and O. sativa Japonica, as well as against each other new rice genome
Updated data
Ensembl Fungi
Latest annotations for S. pombe from PomBase
GO annotation projected from S cerevisiae and S pombe to all species
Ensembl Metazoa
Latest EST-based genes for many species
Removal of haplotype regions in Anopheles gambiae
Peptide comparative genomes
Ensembl Plants
Updated UniGene alignments in T. aestivum against its progenitors
Peptide comparative genomes
Questions or comments?
Drop us a line at helpdesk at ensemblgenomes.org
The Ensembl Genomes team
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