[ensembl-dev] Ensembl REST API | GET xrefs/name/:species/:name
Ramiro Magno
ramiro.magno at gmail.com
Mon Oct 21 13:29:17 BST 2019
Hi Devs,
as a follow up: where can I find the doc details about these extra fields
retrieved when we set the parameter all_levels=1:
1. evalue
2. xref_start
3. xref_end
4. ensembl_start
5. ensembl_end
6. xref_identity
7. cigar_line
8. score
9. ensembl_identity
10. linkage_types
Example:
https://rest.ensembl.org/xrefs/id/ENSG00000157764?all_levels=1;content-type=application/json
Thank you. Best regards,
RM
On Mon, 21 Oct 2019 at 09:37, Ramiro Magno <ramiro.magno at gmail.com> wrote:
> Hi Devs,
>
> Given this endpoint: https://rest.ensembl.org/documentation/info/xref_name
>
> where can I find documentation details about theeach of the fields in the
> json response file?
>
> {
> "description": "",
> "info_type": "DIRECT",
> "primary_id": "15",
> "db_display_name": "DataBase of Aberrant 3' Splice Sites",
> "display_id": "BRCA2",
> "dbname": "DBASS3",
> "version": "1",
> "synonyms": [],
> "info_text": "Generated via Database of aberrant 3' splice sites."
> }
>
>
> Thank you. Regards,
>
> RM
>
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